ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rgwA1 - ECOD Domain | ECOD

ECOD/Domains/e4rgwA1

e4rgwA1

UID: 001414923

RepresentativePDB

Range: A:609-815,A:902-1109
PDB: 4RGW chain A(all domains)
UniProt: P21675 (all domains)
Gene: TAF1

Molecule: Transcription initiation factor TFIID subunit 1

3D Structure

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Related Domains

Browse other domains in DUF3591 →

Classification

AArchitecturebeta complex topology(a.5)

XX-grouptriple barrel(59)

HH-grouptriple barrel(59.1)

TT-groupTFIID subunits TAF1-TAF7(59.1.4)

FFamilyDUF3591(59.1.4.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12157DUF3591

Protein of unknown function (DUF3591)

ClanCL0662Triple_barrel

External Links

ECOD PDB View: 4RGW RCSB PDB: 4RGW PDBe: 4RGW UniProt: P21675

Downloads

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