ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j3q5w2 - ECOD Domain | ECOD

ECOD/Domains/e3j3q5w2

e3j3q5w2

UID: 001416717

PDB

Range: 5w:147-231
PDB: 3J3Q chain 5w(all domains)
UniProt: Q79791 (all domains)
Gene: gag

Molecule: Gag polyprotein [Cleaved into: Matrix protein p17 (MA)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 3J3Q RCSB PDB: 3J3Q PDBe: 3J3Q UniProt: Q79791

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure