ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3pmsA2 - ECOD Domain | ECOD

ECOD/Domains/e3pmsA2

e3pmsA2

UID: 000142168

PDB

Range: A:141-314
PDB: 3PMS chain A(all domains)
UniProt: Q9XBM8 (all domains)
Gene: png

Molecule: Peptide:N-glycosidase F (EC 3.5.1.52)

3D Structure

Loading viewer...

Related Domains

Browse other domains in N-glycanase_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyN-glycanase_C(10.2.1.47)

Pfam Families

PF09113N-glycanase_C

Peptide-N-glycosidase F, C terminal

ClanCL0612PHM_PNGase_F

External Links

ECOD PDB View: 3PMS RCSB PDB: 3PMS PDBe: 3PMS UniProt: Q9XBM8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure