ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4lt8XE1 - ECOD Domain | ECOD

ECOD/Domains/e4lt8XE1

e4lt8XE1

UID: 001422801

PDB

Range: XE:5-73
PDB: 4LT8 chain XE(all domains)
UniProt: Q5SHQ5 (all domains)
Gene: rpsE

Molecule: Small ribosomal subunit protein uS5 (30S ribosomal protein S5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 4LT8 RCSB PDB: 4LT8 PDBe: 4LT8 UniProt: Q5SHQ5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure