ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4p8kA2 - ECOD Domain | ECOD

ECOD/Domains/e4p8kA2

e4p8kA2

UID: 001423406

PDB

Range: A:195-461
PDB: 4P8K chain A(all domains)
UniProt: P9WJF0 (all domains)
Gene: dprE1

Molecule: Probable decaprenylphosphoryl-beta-D-ribose oxidase

3D Structure

Loading viewer...

Related Domains

Browse other domains in ALO →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyALO(304.6.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
3-[(4-methoxybenzyl)amino]-6-(trifluoromethyl)quinoxaline-2-carboxylic acid38C

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

D-arabinono-1,4-lactone oxidase

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 4P8K RCSB PDB: 4P8K PDBe: 4P8K UniProt: P9WJF0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure