ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p8yA1 - ECOD Domain | ECOD

ECOD/Domains/e4p8yA1

e4p8yA1

UID: 001423429

PDB

Range: A:4-194
PDB: 4P8Y chain A(all domains)
UniProt: P9WJF0 (all domains)
Gene: dprE1

Molecule: Probable decaprenylphosphoryl-beta-D-ribose oxidase

3D Structure

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Related Domains

Browse other domains in FAD_binding_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupFAD-binding domain-like(217)

HH-groupFAD-binding domain(217.1)

TT-groupFAD-binding domain(217.1.1)

FFamilyFAD_binding_4(217.1.1.2)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
3-[(4-methoxybenzyl)amino]-6-(trifluoromethyl)quinoxaline-2-carboxylic acid38C

+ 1 additive (Imidazole)

Pfam Families

PF01565FAD_binding_4

FAD binding domain

ClanCL0077FAD_PCMH

External Links

ECOD PDB View: 4P8Y RCSB PDB: 4P8Y PDBe: 4P8Y UniProt: P9WJF0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Imidazole

DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.