ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4u3nd61 - ECOD Domain | ECOD

ECOD/Domains/e4u3nd61

e4u3nd61

UID: 001424764

PDB

Range: d6:2-98
PDB: 4U3N chain d6(all domains)
UniProt: P39939 (all domains)
Gene: RPS26B

Molecule: 40S ribosomal protein S26-B

3D Structure

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Related Domains

Browse other domains in Ribosomal_S26e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyRibosomal_S26e(377.1.1.8)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateA
drugDrugBank DB00131within 5 Å only
Cytidine-5'-MonophosphateC
drugDrugBank DB03403

Pfam Families

PF01283Ribosomal_S26e

Ribosomal protein S26e

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 4U3N RCSB PDB: 4U3N PDBe: 4U3N UniProt: P39939

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

Magnesium ionMG

metal

osmium (III) hexammineOHX

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.