ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3qqcD1 - ECOD Domain | ECOD

ECOD/Domains/e3qqcD1

e3qqcD1

UID: 000142752

PDB

Range: D:1-86
PDB: 3QQC chain D(all domains)
UniProt: Q8TZK1 (all domains)
Gene: spt5

Molecule: Transcription elongation factor Spt5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Spt5-NGN →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupN-utilization substance G protein NusG, N-terminal domain(304.17)

TT-groupN-utilization substance G protein NusG, N-terminal domain(304.17.1)

FFamilySpt5-NGN(304.17.1.2)

Pfam Families

PF03439Spt5-NGN

Early transcription elongation factor of RNA pol II, NGN section

ClanCL0439NusG-like

External Links

ECOD PDB View: 3QQC RCSB PDB: 3QQC PDBe: 3QQC UniProt: Q8TZK1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure