ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kshB1 - ECOD Domain | ECOD

ECOD/Domains/e1kshB1

e1kshB1

UID: 000001429

RepresentativePDB

Range: B:2-150
PDB: 1KSH chain B(all domains)
UniProt: O43924 (all domains)
Gene: PDE6D

Molecule: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (GMP-PDE delta) (Protein p17)

3D Structure

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Related Domains

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Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGMP_PDE_delta(11.1.1.76)

Pfam Families

PF05351GMP_PDE_delta

GMP-PDE, delta subunit

ClanCL0159E-set

External Links

ECOD PDB View: 1KSH RCSB PDB: 1KSH PDBe: 1KSH UniProt: O43924

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