ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4v5yDF1 - ECOD Domain | ECOD

ECOD/Domains/e4v5yDF1

e4v5yDF1

UID: 001434051

PDB

Range: DF:1-178
PDB: 4V5Y chain DF(all domains)
UniProt: P62399 (all domains)
Gene: rplE

Molecule: Large ribosomal subunit protein uL5 (50S ribosomal protein L5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L5,Ribosomal_L5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRibosomal_L5,Ribosomal_L5_C(882.1.1.2)

Pfam Families

PF00281Ribosomal_L5

Ribosomal protein L5

ClanCL0652S24e_L23_L15e

PF00673Ribosomal_L5_C

ribosomal L5P family C-terminus

External Links

ECOD PDB View: 4V5Y RCSB PDB: 4V5Y PDBe: 4V5Y UniProt: P62399

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure