ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3r4dB1 - ECOD Domain | ECOD

ECOD/Domains/e3r4dB1

e3r4dB1

UID: 000143622

PDB

Range: B:15-39,B:65-268
PDB: 3R4D chain B(all domains)
UniProt: Q9J3E7 (all domains)
Gene: ORF3

Molecule: Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2; Spike protein S2']

3D Structure

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Related Domains

Browse other domains in bCoV_S1_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilybCoV_S1_N(10.1.1.39)

Pfam Families

PF16451bCoV_S1_N

Betacoronavirus-like spike glycoprotein S1, N-terminal

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3R4D RCSB PDB: 3R4D PDBe: 3R4D UniProt: Q9J3E7

Downloads

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