ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v88Bm1 - ECOD Domain | ECOD

ECOD/Domains/e4v88Bm1

e4v88Bm1

UID: 001441018

PDB

Range: Bm:77-128
PDB: 4V88 chain Bm(all domains)
UniProt: P0CH08 (all domains)
Gene: RPL40A

Molecule: Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A (60S ribosomal protein L40-A) (CEP52)]

3D Structure

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Related Domains

Browse other domains in Ribosomal_L40e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L40e(375.1.1.6)

Pfam Families

PF01020Ribosomal_L40e

Ribosomal L40e family

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4V88 RCSB PDB: 4V88 PDBe: 4V88 UniProt: P0CH08

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