ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4v8mBs1 - ECOD Domain | ECOD

ECOD/Domains/e4v8mBs1

e4v8mBs1

UID: 001442420

PDB

Range: Bs:1-52
PDB: 4V8M chain Bs(all domains)
UniProt: P21899 (all domains)

Molecule: Ubiquitin-ribosomal protein eL40 fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40 (60S ribosomal protein L40) (CEP52)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L40e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L40e(375.1.1.6)

Pfam Families

PF01020Ribosomal_L40e

Ribosomal L40e family

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4V8M RCSB PDB: 4V8M PDBe: 4V8M UniProt: P21899

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure