ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v9gBM1 - ECOD Domain | ECOD

ECOD/Domains/e4v9gBM1

e4v9gBM1

UID: 001445466

PDB

Range: BM:1-304
PDB: 4V9G chain BM(all domains)
UniProt: P0C0Y9 (all domains)
Gene: pufM

Molecule: Reaction center protein M chain

3D Structure

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Related Domains

Browse other domains in Photo_RC →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBacterial photosystem II reaction centre L and M subunits-like(5037)

HH-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1)

TT-groupBacterial photosystem II reaction centre L and M subunits-like(5037.1.1)

FFamilyPhoto_RC(5037.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
Bacteriopheophytin aBPH
FE (II) IONFE2

Pfam Families

PF00124Photo_RC

Photosynthetic reaction centre protein

External Links

ECOD PDB View: 4V9G RCSB PDB: 4V9G PDBe: 4V9G UniProt: P0C0Y9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.