ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3t4mA1 - ECOD Domain | ECOD

ECOD/Domains/e3t4mA1

e3t4mA1

UID: 000145108

PDB

Range: A:1-207
PDB: 3T4M chain A(all domains)
UniProt: Q8WSF8 (all domains)
Gene: LOC100533247

Molecule: Soluble acetylcholine receptor

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD
Calcium ionCA
metalwithin 5 Å only

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 3T4M RCSB PDB: 3T4M PDBe: 3T4M UniProt: Q8WSF8

Downloads

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DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.