ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u5mA1 - ECOD Domain | ECOD

ECOD/Domains/e3u5mA1

e3u5mA1

UID: 000147371

PDB

Range: A:885-943
PDB: 3U5M chain A(all domains)
UniProt: Q9UPN9 (all domains)
Gene: TRIM33

Molecule: E3 ubiquitin-protein ligase TRIM33

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 3U5M RCSB PDB: 3U5M PDBe: 3U5M UniProt: Q9UPN9

Downloads

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