ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pjol1 - ECOD Domain | ECOD

ECOD/Domains/e4pjol1

e4pjol1

UID: 001482424

PDB

Range: l:2-54
PDB: 4PJO chain l(all domains)
UniProt: P09234 (all domains)
Gene: SNRPC

Molecule: U1 small nuclear ribonucleoprotein C

3D Structure

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Related Domains

Browse other domains in zf-U1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-U1(386.1.1.9)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Zinc ionZN
metal

+ 1 additive (HEPES)

HEPES

Pfam Families

U1 zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 4PJO RCSB PDB: 4PJO PDBe: 4PJO UniProt: P09234

Downloads

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DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.