ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rdpB1 - ECOD Domain | ECOD

ECOD/Domains/e4rdpB1

e4rdpB1

UID: 001488633

PDB

Range: B:2-207,B:227-287
PDB: 4RDP chain B(all domains)
UniProt: Q8U1S9 (all domains)
Gene: cmr4

Molecule: CRISPR system Cmr endoribonuclease Cmr4 (EC 3.1.-.-) (CRISPR type III-B/RAMP module RAMP protein Cmr4) (Target RNase Cmr4)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCas7-related(304.139)

TT-groupCRISPR-associated protein Cas7/Csa2-related(304.139.1)

FFamilyRAMPs(304.139.1.2)

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4RDP RCSB PDB: 4RDP PDBe: 4RDP UniProt: Q8U1S9

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