ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wcmA1 - ECOD Domain | ECOD

ECOD/Domains/e4wcmA1

e4wcmA1

UID: 001488658

PDB

Range: A:23-267
PDB: 4WCM chain A(all domains)
UniProt: B5ZAD9 (all domains)
Gene: HPG27_353

Molecule: Conserved hypothetical secreted protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M99 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M99(2011.1.1.15)

Ligands

in contact, ≤ 4 Å

2,6-Diaminopimelic AcidAPI
drugDrugBank DB03590
Iodide ionIOD
Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Pfam Families

PF17033Peptidase_M99

Carboxypeptidase controlling helical cell shape catalytic

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 4WCM RCSB PDB: 4WCM PDBe: 4WCM UniProt: B5ZAD9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.