ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3x00C1 - ECOD Domain | ECOD

ECOD/Domains/e3x00C1

e3x00C1

UID: 001489703

PDB

Range: C:13-134
PDB: 3X00 chain C(all domains)
UniProt: P22629 (all domains)

Molecule: Streptavidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

EthylenediamineEDN
drugDrugBank DB14189
6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acidZOF

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Avidin family

External Links

ECOD PDB View: 3X00 RCSB PDB: 3X00 PDBe: 3X00 UniProt: P22629

Downloads

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