ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x5mB1 - ECOD Domain | ECOD

ECOD/Domains/e4x5mB1

e4x5mB1

UID: 001490311

PDB

Range: B:1-89
PDB: 4X5M chain B(all domains)
UniProt: P0DMV3 (all domains)
Gene: G925_04926

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in PQ-loop →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupTOG superfamily(6155)

HH-groupSWEET transporter(6155.1)

TT-groupSWEET transporter(6155.1.1)

FFamilyPQ-loop(6155.1.1.2)

Ligands

in contact, ≤ 4 Å

Oleic acidOLA
(2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLB
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Pfam Families

PF04193PQ-loop

PQ loop repeat

ClanCL0141MtN3-like

External Links

ECOD PDB View: 4X5M RCSB PDB: 4X5M PDBe: 4X5M UniProt: P0DMV3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.