ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4qyzJ1 - ECOD Domain | ECOD

ECOD/Domains/e4qyzJ1

e4qyzJ1

UID: 001491576

PDB

Range: J:1-219
PDB: 4QYZ chain J(all domains)
UniProt: Q46898 (all domains)
Gene: casD

Molecule: CRISPR system Cascade subunit CasD

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas_Cas5d →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR system Cas5 homologs(304.158)

TT-groupCRISPR system Cas5 homologs(304.158.1)

FFamilyCas_Cas5d(304.158.1.2)

Pfam Families

PF09704Cas_Cas5d

CRISPR-associated protein (Cas_Cas5)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4QYZ RCSB PDB: 4QYZ PDBe: 4QYZ UniProt: Q46898

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure