ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4v1mE2 - ECOD Domain | ECOD

ECOD/Domains/e4v1mE2

e4v1mE2

UID: 001495385

PDB

Range: E:2-142
PDB: 4V1M chain E(all domains)
UniProt: P20434 (all domains)
Gene: RPB5

Molecule: DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (ABC27) (DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb5_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupEukaryotic RPB5 N-terminal domain(2008.3)

TT-groupEukaryotic RPB5 N-terminal domain(2008.3.1)

FFamilyRNA_pol_Rpb5_N(2008.3.1.1)

Pfam Families

PF03871RNA_pol_Rpb5_N

RNA polymerase Rpb5, N-terminal domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 4V1M RCSB PDB: 4V1M PDBe: 4V1M UniProt: P20434

Downloads

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