ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u0pA2 - ECOD Domain | ECOD

ECOD/Domains/e3u0pA2

e3u0pA2

UID: 000149544

PDB

Range: A:6-183
PDB: 3U0P chain A(all domains)
UniProt: P15813 (all domains)
Gene: CD1D

Molecule: Antigen-presenting glycoprotein CD1d

3D Structure

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Related Domains

Browse other domains in MHC_I_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I_3(233.1.1.6)

Ligands

in contact, ≤ 4 Å

HexaneHEX
(4R,7R,18E)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxideLSC
N-butaneNBU

Pfam Families

PF16497MHC_I_3

MHC-I family domain

ClanCL0343MHC

External Links

ECOD PDB View: 3U0P RCSB PDB: 3U0P PDBe: 3U0P UniProt: P15813

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

UndecaneUND

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.