ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4x67E1 - ECOD Domain | ECOD

ECOD/Domains/e4x67E1

e4x67E1

UID: 001497887

PDB

Range: E:2-142
PDB: 4X67 chain E(all domains)
UniProt: P20434 (all domains)
Gene: RPB5

Molecule: DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (ABC27) (DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_pol_Rpb5_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupEukaryotic RPB5 N-terminal domain(2008.3)

TT-groupEukaryotic RPB5 N-terminal domain(2008.3.1)

FFamilyRNA_pol_Rpb5_N(2008.3.1.1)

Pfam Families

PF03871RNA_pol_Rpb5_N

RNA polymerase Rpb5, N-terminal domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 4X67 RCSB PDB: 4X67 PDBe: 4X67 UniProt: P20434

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure