ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4cp5B1 - ECOD Domain | ECOD

ECOD/Domains/e4cp5B1

e4cp5B1

UID: 001500059

PDB

Range: B:5-155
PDB: 4CP5 chain B(all domains)
UniProt: P22887 (all domains)
Gene: ndkC-1

Molecule: NUCLEOSIDE DIPHOSPHATE KINASE, CYTOSOLIC

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

[[(2R)-1-(6-aminopurin-9-yl)propan-2-yl]oxymethyl-sulfanyl-phosphoryl] phosphono hydrogen phosphateEOI

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 4CP5 RCSB PDB: 4CP5 PDBe: 4CP5 UniProt: P22887

Downloads

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