ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4s2yA1 - ECOD Domain | ECOD

ECOD/Domains/e4s2yA1

e4s2yA1

UID: 001500242

PDB

Range: A:2-161
PDB: 4S2Y chain A(all domains)
UniProt: P0A776 (all domains)
Gene: rppH

Molecule: RNA pyrophosphohydrolase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 4S2Y RCSB PDB: 4S2Y PDBe: 4S2Y UniProt: P0A776

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.