ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4a52A2 - ECOD Domain | ECOD

ECOD/Domains/e4a52A2

e4a52A2

UID: 000150353

PDB

Range: A:5-51
PDB: 4A52 chain A(all domains)
UniProt: O34816 (all domains)
Gene: ykuD

Molecule: Putative L,D-transpeptidase YkuD (EC 2.-.-.-) (Spore protein YkuD)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LysM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupLysM domain(101.15)

TT-groupLysM domain(101.15.1)

FFamilyLysM(101.15.1.1)

Pfam Families

LysM domain

ClanCL0187LysM

External Links

ECOD PDB View: 4A52 RCSB PDB: 4A52 PDBe: 4A52 UniProt: O34816

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure