ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ilmJ1 - ECOD Domain | ECOD

ECOD/Domains/e4ilmJ1

e4ilmJ1

UID: 001505358

PDB

Range: J:122-286
PDB: 4ILM chain J(all domains)
UniProt: Q97WV8 (all domains)
Gene: cas6b

Molecule: CRISPR-associated endoribonuclease Cas6 2 (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in CRISPR_Cas6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCRISPR_Cas6(304.51.1.7)

Pfam Families

PF10040CRISPR_Cas6

CRISPR-associated endoribonuclease Cas6

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4ILM RCSB PDB: 4ILM PDBe: 4ILM UniProt: Q97WV8

Downloads

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