ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4ilmJ2 - ECOD Domain | ECOD

ECOD/Domains/e4ilmJ2

e4ilmJ2

UID: 001505359

PDB

Range: J:1-121
PDB: 4ILM chain J(all domains)
UniProt: Q97WV8 (all domains)
Gene: cas6b

Molecule: CRISPR-associated endoribonuclease Cas6 2 (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas6_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas6_N(304.51.1.9)

Pfam Families

Cas6 N-terminal domain

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4ILM RCSB PDB: 4ILM PDBe: 4ILM UniProt: Q97WV8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure