ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3tpzB1 - ECOD Domain | ECOD

ECOD/Domains/e3tpzB1

e3tpzB1

UID: 001515176

PDB

Range: B:1-201
PDB: 3TPZ chain B(all domains)
UniProt: P06992 (all domains)
Gene: rsmA

Molecule: Ribosomal RNA small subunit methyltransferase A

3D Structure

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Related Domains

Browse other domains in RrnaAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyRrnaAD(2003.1.5.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosomal RNA adenine dimethylase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3TPZ RCSB PDB: 3TPZ PDBe: 3TPZ UniProt: P06992

Downloads

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