ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t5aD2 - ECOD Domain | ECOD

ECOD/Domains/e1t5aD2

e1t5aD2

UID: 001517430

PDB

Range: D:13-116,D:219-396
PDB: 1T5A chain D(all domains)
UniProt: P14618 (all domains)
Gene: PKM

Molecule: Pyruvate kinase, M2 isozyme

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Magnesium ionMG
metal

+ 3 additives (Glycerin, Phosphate ion, Oxalate ion)

Glycerin

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 1T5A RCSB PDB: 1T5A PDBe: 1T5A UniProt: P14618

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.