ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3myuB1 - ECOD Domain | ECOD

ECOD/Domains/e3myuB1

e3myuB1

UID: 001518834

RepresentativePDB

Range: B:32-114,B:307-367
PDB: 3MYU chain B(all domains)
UniProt: Q49410 (all domains)
Gene: p37

Molecule: High affinity transport system protein p37

3D Structure

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Related Domains

Browse other domains in CypI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyCypI(7523.1.1.18)

Ligands

in contact, ≤ 4 Å

ThiamineVIB
drugDrugBank DB00152

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

Extracytoplasmic thiamine-binding lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 3MYU RCSB PDB: 3MYU PDBe: 3MYU UniProt: Q49410

Downloads

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Drug annotations from DrugDomain.