ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b3nA1 - ECOD Domain | ECOD

ECOD/Domains/e4b3nA1

e4b3nA1

UID: 001518850

RepresentativePDB

Range: A:5-110,A:261-374
PDB: 4B3N chain A(all domains)
UniProt: Q0PF16 (all domains)
Gene: TRIM5

Molecule: Tripartite motif-containing protein 5 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase TRIM5) (TRIM5alpha)

3D Structure

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Related Domains

Browse other domains in SBP_bac_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_1(7523.1.1.8)

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 4B3N RCSB PDB: 4B3N PDBe: 4B3N UniProt: Q0PF16

Downloads

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