ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y34A1 - ECOD Domain | ECOD

ECOD/Domains/e4y34A1

e4y34A1

UID: 001519292

PDB

Range: A:1-369
PDB: 4Y34 chain A(all domains)
UniProt: Q5UEA2 (all domains)

Molecule: 3D polymerase

3D Structure

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Related Domains

Browse other domains in RdRP_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_1(304.48.1.8)

Ligands

in contact, ≤ 4 Å

2,2'-[(4-fluorobenzene-1,2-diyl)bis(oxy)]bis(5-nitrobenzonitrile)45Z

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA-dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4Y34 RCSB PDB: 4Y34 PDBe: 4Y34 UniProt: Q5UEA2

Downloads

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