ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ys8D1 - ECOD Domain | ECOD

ECOD/Domains/e4ys8D1

e4ys8D1

UID: 001519375

PDB

Range: D:2-230
PDB: 4YS8 chain D(all domains)
UniProt: Q2SWT6 (all domains)
Gene: ispD

Molecule: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

3D Structure

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Related Domains

Browse other domains in IspD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 4YS8 RCSB PDB: 4YS8 PDBe: 4YS8 UniProt: Q2SWT6

Downloads

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