ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ci8A2 - ECOD Domain | ECOD

ECOD/Domains/e3ci8A2

e3ci8A2

UID: 001519901

PDB

Range: A:342-431,A:594-686
PDB: 3CI8 chain A(all domains)
UniProt: P24627 (all domains)
Gene: LTF

Molecule: Lactotransferrin

3D Structure

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Related Domains

Browse other domains in Transferrin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyTransferrin(7523.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
NiacinNIO
drugDrugBank DB00627
FE (III) ION

Pfam Families

PF00405Transferrin

Transferrin

ClanCL0177PBP

External Links

ECOD PDB View: 3CI8 RCSB PDB: 3CI8 PDBe: 3CI8 UniProt: P24627

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 1 additive (Carbonate ion)

Carbonate ionCO3
DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.