ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2uyfB1 - ECOD Domain | ECOD

ECOD/Domains/e2uyfB1

e2uyfB1

UID: 001522938

PDB

Range: B:76-168,B:272-301
PDB: 2UYF chain B(all domains)
UniProt: Q8VUD7 (all domains)

Molecule: REGULATORY PROTEIN

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

Thiocyanate ionSCN

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 2UYF RCSB PDB: 2UYF PDBe: 2UYF UniProt: Q8VUD7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.