ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wkyA1 - ECOD Domain | ECOD

ECOD/Domains/e2wkyA1

e2wkyA1

UID: 001523072

PDB

Range: A:4-107,A:215-258
PDB: 2WKY chain A(all domains)
UniProt: P22756 (all domains)
Gene: Grik1

Molecule: GLUTAMATE RECEPTOR, IONOTROPIC KAINATE 1

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

2-Amino-3-(3-Hydroxy-7,8-Dihydro-6h-Cyclohepta[D]-4-Isoxazolyl)Propionic AcidIBC
drugDrugBank DB04152
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

ECOD PDB View: 2WKY RCSB PDB: 2WKY PDBe: 2WKY UniProt: P22756

Downloads

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