ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3vjrA1 - ECOD Domain | ECOD

ECOD/Domains/e3vjrA1

e3vjrA1

UID: 000152487

PDB

Range: A:5-197
PDB: 3VJR chain A(all domains)
UniProt: P0A7D1 (all domains)
Gene: pth

Molecule: Peptidyl-tRNA hydrolase (Pth) (EC 3.1.1.29) [Cleaved into: Peptidyl-tRNA hydrolase, N-terminally processed]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pept_tRNA_hydro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupPeptidyl-tRNA hydrolase-like(2011.2)

TT-groupPeptidyl-tRNA hydrolase-like(2011.2.1)

FFamilyPept_tRNA_hydro(2011.2.1.3)

Pfam Families

PF01195Pept_tRNA_hydro

Peptidyl-tRNA hydrolase

ClanCL0408PUP

External Links

ECOD PDB View: 3VJR RCSB PDB: 3VJR PDBe: 3VJR UniProt: P0A7D1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure