ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ephB2 - ECOD Domain | ECOD

ECOD/Domains/e3ephB2

e3ephB2

UID: 001526833

PDB

Range: B:124-188
PDB: 3EPH chain B(all domains)
UniProt: P07884 (all domains)
Gene: MOD5

Molecule: tRNA dimethylallyltransferase (DMATase) (EC 2.5.1.75) (Isopentenyl-diphosphate: tRNA isopentenyltransferase) (IPP transferase) (IPPT) (tRNA isopentenyltransferase) (IPTase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in IPPT →

Classification

AArchitecturealpha arrays(a.6)

XX-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949)

HH-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1)

TT-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1.1)

FFamilyIPPT(3949.1.1.1)

Pfam Families

IPP transferase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3EPH RCSB PDB: 3EPH PDBe: 3EPH UniProt: P07884

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure