ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4b5dA1 - ECOD Domain | ECOD

ECOD/Domains/e4b5dA1

e4b5dA1

UID: 000152743

PDB

Range: A:2-212
PDB: 4B5D chain A(all domains)
UniProt: I6L8L2 (all domains)

Molecule: CAPITELLA TELETA ACHBP

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
2-[(1R,2S)-2-[5-[[(2S)-azetidin-2-yl]methoxy]pyridin-3-yl]cyclopropyl]ethanolSW4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 4B5D RCSB PDB: 4B5D PDBe: 4B5D UniProt: I6L8L2

Downloads

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