ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3t66A1 - ECOD Domain | ECOD

ECOD/Domains/e3t66A1

e3t66A1

UID: 001527775

PDB

Range: A:12-43,A:144-237,A:458-487
PDB: 3T66 chain A(all domains)
UniProt: Q9KBX8 (all domains)
Gene: BH1796

Molecule: Nickel ABC transporter (Nickel-binding protein)

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_5(7523.1.1.3)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 3T66 RCSB PDB: 3T66 PDBe: 3T66 UniProt: Q9KBX8

Downloads

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