ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gb331 - ECOD Domain | ECOD

ECOD/Domains/e4gb331

e4gb331

UID: 000152805

PDB

Range: 3:1-238
PDB: 4GB3 chain 3(all domains)
UniProt: F8VA14 (all domains)

Molecule: coat protein 3

3D Structure

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Related Domains

Browse other domains in Rhv →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyRhv(10.2.1.1)

Ligands

in contact, ≤ 4 Å

Myristic acidMYR
drugDrugBank DB08231within 5 Å only
Palmitic AcidPLM
drugDrugBank DB03796within 5 Å only

Pfam Families

picornavirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 4GB3 RCSB PDB: 4GB3 PDBe: 4GB3 UniProt: F8VA14

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.