ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fdvA1 - ECOD Domain | ECOD

ECOD/Domains/e4fdvA1

e4fdvA1

UID: 000153197

PDB

Range: A:2-209
PDB: 4FDV chain A(all domains)
UniProt: D5AV08 (all domains)
Gene: cobH

Molecule: Precorrin-8X methylmutase

3D Structure

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Related Domains

Browse other domains in CbiC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupPrecorrin-8X methylmutase CbiC/CobH(2007.7)

TT-groupPrecorrin-8X methylmutase CbiC/CobH(2007.7.1)

FFamilyCbiC(2007.7.1.1)

Ligands

in contact, ≤ 4 Å

3-[(1R,2R,3R,5R,6S,7R,9Z,12S,13S,14Z,17S,18S,19R)-2,13,18-tris(2-hydroxy-2-oxoethyl)-3,12,17-tris(3-hydroxy-3-oxopropyl)-3,5,8,8,13,15,18,19-octamethyl-1,2,5,6,7,12,17,22-octahydrocorrin-7-yl]propanoic acid0UK

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

Precorrin-8X methylmutase

External Links

ECOD PDB View: 4FDV RCSB PDB: 4FDV PDBe: 4FDV UniProt: D5AV08

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.