ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4b8aB1 - ECOD Domain | ECOD

ECOD/Domains/e4b8aB1

e4b8aB1

UID: 000153942

PDB

Range: B:6-283
PDB: 4B8A chain B(all domains)
UniProt: P39008 (all domains)
Gene: POP2

Molecule: Poly(A) ribonuclease POP2 (EC 3.1.13.4) (CCR4-associated factor 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in CAF1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyCAF1(2484.1.1.45)

Pfam Families

CAF1 family ribonuclease

ClanCL0219RNase_H

External Links

ECOD PDB View: 4B8A RCSB PDB: 4B8A PDBe: 4B8A UniProt: P39008

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure