ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4uypD1 - ECOD Domain | ECOD

ECOD/Domains/e4uypD1

e4uypD1

UID: 001546665

PDB

Range: D:1-73
PDB: 4UYP chain D(all domains)
UniProt: Q7WYN3 (all domains)
Gene: scaB

Molecule: Cellulosomal scaffoldin adaptor protein B

3D Structure

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Related Domains

Browse other domains in Dockerin_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupType I dockerin domain(108.1.2)

FFamilyDockerin_1(108.1.2.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 3 additives (HEPES, (4r)-2-Methylpentane-2,4-Diol, Sulfate ion)

HEPESEPE
DrugBank DB16872
(4r)-2-Methylpentane-2,4-Diol

Pfam Families

PF00404Dockerin_1

Dockerin type I domain

ClanCL0220EF_hand

External Links

ECOD PDB View: 4UYP RCSB PDB: 4UYP PDBe: 4UYP UniProt: Q7WYN3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.