ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3j9mAD1 - ECOD Domain | ECOD

ECOD/Domains/e3j9mAD1

e3j9mAD1

UID: 001546873

PDB

Range: AD:88-215
PDB: 3J9M chain AD(all domains)
UniProt: P82675 (all domains)
Gene: MRPS5

Molecule: Small ribosomal subunit protein uS5m (28S ribosomal protein S5, mitochondrial) (MRP-S5) (S5mt)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_uS5m_N →

Classification

AArchitectureextended segments(a.20)

XX-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274)

HH-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1)

TT-groupN-terminal region in 40S ribosomal protein rpS2 (S5p)(3274.1.1)

FFamilyRibosomal_uS5m_N(3274.1.1.2)

Pfam Families

PF21251Ribosomal_uS5m_N

Small ribosomal subunit protein uS5m, N-terminal

External Links

ECOD PDB View: 3J9M RCSB PDB: 3J9M PDBe: 3J9M UniProt: P82675

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure