ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4s26A1 - ECOD Domain | ECOD

ECOD/Domains/e4s26A1

e4s26A1

UID: 001548048

PDB

Range: A:77-595
PDB: 4S26 chain A(all domains)
UniProt: O82392 (all domains)
Gene: THIC

Molecule: Phosphomethylpyrimidine synthase, chloroplastic

3D Structure

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Related Domains

Browse other domains in ThiC_Rad_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyThiC_Rad_SAM(2002.1.1.81)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Chloride ionCL
1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazoleIRN

Pfam Families

PF01964ThiC_Rad_SAM

Radical SAM ThiC family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4S26 RCSB PDB: 4S26 PDBe: 4S26 UniProt: O82392

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.