ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2okcA2 - ECOD Domain | ECOD

ECOD/Domains/e2okcA2

e2okcA2

UID: 001548121

RepresentativePDB

Range: A:9-147
PDB: 2OKC chain A(all domains)
UniProt: Q89Z59 (all domains)
Gene: hsdM

Molecule: Type I restriction enzyme StySJI M protein

3D Structure

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Related Domains

Browse other domains in HsdM_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupN-terminal helical domain in restriction-modification system methylation subunit-like(3962)

HH-groupN-terminal helical domain in restriction-modification system methylation subunit(3962.1)

TT-groupN-terminal helical domain in restriction-modification system methylation subunit(3962.1.1)

FFamilyHsdM_N(3962.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

HsdM N-terminal domain

ClanCL0884MmeI_HD-like

External Links

ECOD PDB View: 2OKC RCSB PDB: 2OKC PDBe: 2OKC UniProt: Q89Z59

Downloads

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